Supplementary Material: Gene Expression Trees in Lymphoid Development

Ivan G. Costa, Stefan Roepcke, Alexander Schliep

Software

A implementation of the software and a tutorial are found here.

Data Sets

The normalized data sets analysed in the paper are found in Tcell, Bcell and LympTree. Respectively, one can also find the tree topology files at Tcell, Bcell and LympTree.

Results

Web database, generated with our Mixture of Trees Report tool, with results of the analysis on the above data set are found in MixDTree-MAP Tcell, MixDTree-MLE Tcell, MixDTree-MAP Bcell, MixDTree-MLE Bcell, and LympTree .