MRF (matrix): best mapping to MIPS using the Simpson coefficient

MIPS name Quality score Cluster (genes)
500.40.10
2410.53 RPL10,RPS4B,RPL3,IMD3,PAB1,RPS17B
RPL16A,RPL1A,RPL13B,RPL20A,RPS17A,RPL30
RPS3,RPL2A,RPL2B,RPL4A,RPL7B,RPL8B
RPL27B,RPL4B,RPS4A,RRP5,RPS7A,RPL1B
RPL17A,DED1,RPL17B,RPL20B,RPS1B,RPL7A
RPL6A
510.40.20
133.40
-226.86 MED4,SRB2,MED8,SRB4,SRB5,MED1
SRB8,SSN2,PGD1,YAP1,GAL11,MLP1
SSN8,SRB6,CSE2,SRB7,MED11,NUT2
RGR1,MED6,SSN3,NUT1,MED7,SIN4
360.10.20
360.10.10
-216.97 PRE4,RPN11,PRE6,RPN9,RPN6,RPN10
RPT3,PRE2,PRE1,RPN7,RPT4,RPN2
RPN3,RPN5,RPT1,PUP3,PRE5,SCL1
PRE9,RPN8,PRE7,RPT2,RPN13,RPN1
ECM29,RPT6,RPN12,RPT5
510.190.10.20.10
230.20.20
510.70.20
510.190.10.10
230.20.10
510.190.10.20.20
510.190.10
-309.55 TAF11,NGG1,TAF6,TAF7,TAF12,SGF73
SPT20,SGF29,TAF10,TRA1,GCN5,HFI1
SPT3,SPT7,TAF4,TAF9,TAF3,ADA2
SPT8,TAF5,TAF1
440.30.10
440.30.10.10
440.30.10.20
-227.66 CSN12,SNU114,SNT309,PRP21,PRP6,STO1
LEA1,YLR424W,SMD1,SNU23,LSM2,SNU66
DIB1,MUD1,PRP40,SMD2,CUS1,ECM2
SNU56,HSH155,PRP43,CBC2,SMD3,PRP31
CWC2,PRP46,SYF1,SNU71,RSE1,PRP42
AAR2,PRP4,PRP9,PRP39,LUC7,LSM6
BRR2,MSL1,PRP19,CWC23,PRP3,LSM4
CLF1,SMB1,PRP8,YHC1,SNP1,NAM8
PRP11
510.120
510.10
-208.33 RPC31,RPB8,RPA12,RPC34,RPA190,RPO26
RPA43,MAF1,RPC19,RPB10,RPC11,RPA49
RPC25,RET1,RPC82,RPB5,RPC17,RPC53
RPC40,RPO31,RPC37
500.40.20
336.96 RPS5,RPS22A,ASC1,RPS9A,RPS24B,RPS11B
RPS13,RPS22B,RPS9B,RPS11A,RPS8B
260.60
190.20
-129.36 GSG1,TRS23,TRS120,KRE11,SKN1,BET5
TRS130,BET3,TRS31,TRS33,TRS20
60
510.100
-116.21 TFB4,CDC27,APC1,MND2,CDC16,APC4
SWM1,SSL1,APC2,APC5,CDC23,TFB1
APC9,DOC1
400
320
38.43 RSC2,RSC9,ISW2,RSC4,HHF1,RSC1
RSC3,STH1,ARP9,ISW1,SFH1,NPL6
RSC58,RSC30,MOT1,RSC8,VPS1,HTA2
ABF2,RTT102,ARP7,HTB1,RSC6,ITC1
510.190.50
-30.21 SWI3,SNF12,SNF5,SNF2,SNF6,TAF14
SWI1,SNF11,YFL049W
510.40.10
510.90
-109.54 RPB7,RPB9,RPB3,YPR093C,TFG1,RPB2
RPB11,SPT5,SPT4,RPB4,IWR1,RPO21
TFG2
440.14.10
440.12.20
440.30.20
-98.82 POP8,POP1,POP5,SNM1,POP3,POP7
RPP1,POP4,POP6
440.12.10
-213.51 MTR3,SKI2,RRP42,CSL4,SRP1,RRP46
RRP6,RRP45,SKI3,LRP1,SKI7,RRP43
RRP4,SKI6,DIS3,RRP40
260.30.10
-65.30 RET2,SEC28,RET3,SEC21,COP1,SEC26
SEC27
160
-131.81 VPS9,EXO84,EXO70,SEC8,SEC5,SEC6
SEC10,SEC15,SEC3
520.40
-82.01 SEC65,SST2,SRP72,LHP1,SRP68,SRP54
SRP21,BEM2,SRP14
520.20
-69.34 SWP1,STT3,WBP1,OST6,OST1,OST3
410.35
410.30
410.20
410.10
-57.77 ORC4,ORC3,ORC1,ORC5,ORC6,ORC2
260.90
-125.61 ARC15,CCT8,ARC19,ARC35,ARC40,ARP3
ARC18,ARP2,CCT5
220
-79.26 VMA7,VMA13,RAV2,VMA10,VMA8,VMA4
RAV1,VMA5
510.150
510.190.110
-100.36 CAF40,POP2,TFC8,CDC39,TFC7,TFC3
CAF130,CCR4,TFC1,TFC4,TFC6
500.10.40
500.10.30
500.10.20
15.44 TIF34,SUI3,GCN3,YDR091C,GCD11,HCR1
GCD7,TIF35,GCD6,PRT1,RPG1,GCD2
NIP1,FUN12,TIF5,GCD1,SUI2
470.10
-68.94 PAK1,GAL83,SNF4,SNF1,REG1,SIP2
SIP1
410.40.30
410.40.60
-91.76 CTF18,RFC4,RFC2,PRI2,YMR181C,RFC1
POL12,RFC3,PRI1,RFC5,ELG1,POL1
310.40
-64.12 NUP145,SEH1,NUP84,NUP85,NUP120,MTR2
MEX67
260.30.20
31.79 SEC31,SEC16,CYS4,YDR517W,SEC13,SEC23
SEC24,SFB2
140.10.20
-124.84 CDC3,AIR1,CDC10,CDC11,SHS1,CDC12
BNI4,BUD4
133.10
-80.74 CKS1,CDC28,CLB3,SIC1,CLN2,CLN1
CLB4,YPL014W,SRL3,DAL7,PCA1
130
-34.94 CCT3,CCT6,CCT7,PLP2,VID27,CCT4
CCT2
520.10.20
-63.07 SEC62,SEC72,SEC63,SEC66
440.10.20
440.10.30
-383.09 FIP1,CFT2,PFS2,REF2,SWD2,CFT1
YSH1,PTI1,PAP1,GLC7,SYC1,SSU72
YTH1,MPE1,RNA14,PTA1
420.50
-41.46 CDC37,ATP3,ATP7,ATP1,ATP5
420.40
-34.01 COX4,COX5A,COX6,COX9
390
-21.77 PDX1,PDA1,PDB1,"DUR1+2",LAT1,TCM62
310.10
310
310.20
-108.42 GLE2,NSP1,NIC96,NUP159,NUP82,NUP49
NUP57,NUP116
260.80
90.20
-108.48 PEP5,VPS33,VPS8,VAM6,VPS16,PEP3
VPS41
260.20.30
-66.92 APL5,ECM30,APL6,APM3,UBP15,APS3
260.20.20
-19.49 APL1,APM4,RPS6A,APL3,APS2
260.20.10
-6.66 APL2,APM1,YFL034W,APS1,APM2,APL4
HEK2
177
-73.77 PFD1,GIM5,YKE2,PAC10,BUD27,GIM3
140.20.30
140.20.20
-43.85 CDC47,MCM3,MYO5,MYO4,SHE2,MYO2
SHE3,CDC46,CRN1,MLC1,PDR5,CAP1
MYO1,CAP2,RAD53,CMD1,PSF3,SLD5
120.20
-61.19 RTF1,CKB1,LEO1,CDC73,PAF1,CTR9
CKA1,CKB2,HOT1,CKA2
110
-41.36 BCY1,TPK2,TPK1,TPK3
90.10
-37.34 SXM1,ECM1,RLF2,CAC2,MSI1,LYS2
510.180.10.30
133.30
3.89 RPL11B,RPS16A,RPL35B,RPL33B,RPS14A,RPS24A
RPS18A,TFB3,RPL26B,RPL36A,DCS2,CCL1
RPL14B,KIN28
510.160
-27.49 HAP2,HAP3,HAP5
510.110
133.50
-29.98 CTK3,CTK2,CTK1
480.10.05
-54.72 SPC98,SPC72,SPC97,TUB4
440.12.30
-185.66 SIK1,BFR2,ROK1,DIM1,NOP58,NOP1
UTP15,UTP21,UTP8,KRR1,UTP20,UTP30
UTP7,ENP1,IMP3,KRE33,BMS1,UTP10
YGR145W,ECM16,SOF1,UTP9,NOP14,PWP2
IMP4,UTP4,UTP22,EMG1,MPP10,PNO1
MRD1,UTP6,DIP2,RRP9,NAN1,RCL1
RRP12,NOC4,UTP13,UTP18,RPS8A
440.10.10
-16.43 RNA15,PCF11,HTA1,CLP1
420.30
-83.05 COR1,YLR356W,YLR132C,BRE1,LGE1,QCR2
RBS1,QCR7
410.40.90
-39.98 POL32,CDC2,HYS2
410.40.20
510.180.50.20
510.180.50.10
510.180.20
510.180.10.40
-99.75 MSH2,YDL156W,MSH6,TOP3,MSH3,RFA2
MPH1,RAD52,MGM101,LCD1,RFA1,RFA3
RIM1,DNA2,RAD16,MEC1,SGS1
410.40.100
-11.34 DPB4,DPB3,TOP1,HTB2,POL2,DPB2
260.50.10
470.30.10
260.50.20
-71.16 TLG1,SEC17,GPA1,STE4,TLG2,VTI1
SYN8,AKR1,PEP12,VPS45
260.30.30.10
260.30.30.20
-62.94 VPS35,PEP8,VPS17,VPS5,MIP6,VPS29
RPL26A
240.20
510.190.150
230.20.40
-153.85 YBR095C,YMR075W,RXT3,SIN3,YAF9,EAF3
EPL1,RPD3,DEP1,CTI6,EAF5,PHO23
ESA1,SAP30,UME1,SDS3,VID21,ARP4
20
-2.07 YMR31,KGD2,LPD1,KGD1
133.20
-67.34 PHO80,CYR1,PHO85,PCL8,SRV2,PHO81
90.30
-68.26 VMA22,TRM9,EMI2,VPH2,LYS9,YOL124C
YDR140W,YNR046W
80
230.10
-5.42 CPA2,YLL022C,HAT2,CPA1,HSM3
70
29.58 AHA1,TRP3,TRP2,YKL218C,NOT3
520.50
-49.07 FBP26,SRP102,SRP101,YLR345W
510.50
-33.23 TOA2,CTL1,TOA1
510.190.70
-46.35 YAT1,CYC3,SWI4,MBP1,SWI6
510.190.40
-32.98 NOT5,CDC36,ATP11
510.190.140
-39.72 TUP1,CYC8,YMR196W,CRP1
510.190.130
-39.07 RTG3,RTG1,YIL172C,SAC6
510.180.30.10
11.52 YKU80,YKU70,YIL130W,REB1,YIL056W,NHP6A
RFX1
510.180.10.20
500.20.10
-40.89 YMR187C,RAD23,YDR314C,EFB1,RAD4,CAM1
SRO7,HSL1
510.180.10.10
-22.42 GIN4,YAL027W,YOL070C,KCC4,NIS1,RAD1
HTZ1,HMO1,RAD10
510.170
445.30
445.20
445.10
-35.05 YMR258C,GDH3,CEG1,MRS6,YPT52,GDH1
SKP1,CET1
500.10.80
500.10.110
197.79 SBP1,KEM1,RPS10B,CDC33,TIF4631,CBF5
SRO9,GBP2,TIF4632
485
-29.23 LSC1,PHO87,LSC2
480.20
480.10
-46.36 TID3,NUF2,SPC24,SPC25
430
-58.32 HIR3,ASF1,WTM1,RNR4,RNR2
420.20
-31.23 YDR267C,SDH1,SDH2
370
295
-20.34 NAT1,ENO1,SPO7,ARD1,NEM1,PKC1
350.30
-34.07 MAS2,SMC4,DPH5,MAS1
350.10.10
3.72 HMG2,HMG1,AFG3,RAD51,YTA12
340
89.51 PFK2,EFT1,PFK1
330
-22.43 TSC13,FRS1,BNI1,FRS2
260.70
-34.98 VPS4,BRO1,SNF7
260.10
-29.42 CLC1,END3,CHC1,PAN1,SLA2
180.30
500.50
-46.42 BET2,CYM1,MSS51,BET4,MGE1
180.20
180.10
-35.98 RAM2,CDC43,RAM1
140.30.10
5668.86 KAP123,PSA1,URA2,CDC19,TEF1,RPS0A
RPL5,VMA2,RPP0,SSA2,ADH1,TUB2
TEF2,GFA1,TUB1,SSB1,GCN1
100
-27.23 CNB1,MKK1,CMP2
510.80
-37.35 YJR014W,YNR029C,YER007CA,YKR018C,TFA1
510.190.120
-37.98 HUL5,ARG82,YLR179C
510.140
-25.98 CYK3,YIH1,BRF1
500.60
-35.92 CCP1,LSP1,ICT1,MRP8,GDH2,YLR287C
500.20.20
262.37 ILV1,CLU1,ARO1,RPA135,SAM1,YGL245W
EFT2,TUB3
500.10.50
82.90 LYS12,TIF2
470.20
-34.98 DBP7,YAL049C,STE5
450
-29.98 GTR1,GLC8,DBF2
440.40
-20.07 MSS116,PRS5,YAP3,YJL171C
440.30.30
-22.36 EHT1,SEN2,TUF1,YGL242C
410.40.140
-28.07 TOP2,VPS3,YKR017C,YJL207C
40
110.97 SEC53,MAE1,ILV5,VPS13,TDH1,ADE3
DLD3,TRM3,MSN5,GRS1,CSE1,FUR1
SAR1,APA1,YDR341C,TOM1,YNK1,ILS1
ACC1,AAP1',DPS1,ILV6
380
-13.72 PYK2,YLR143W,SFP1,YKR090W
360.10
-91.85 SDC1,SWD3,BRE2,SET1,SWD1,SPP1
DOA4
300
3.58 SGN1,NPL3,NAM7,NRP1,PUB1
290.20
-32.22 HEM2,TIM44,GLC3
290.10
-15.98 SAC1,HSP104,TOM70
280
-21.98 LYS5,PIM1,YGR250C
265
-19.23 KEL2,YBR287W,YGR068C
250
-17.72 YNL193W,AAC3,IDH1,SHM2
200
-35.98 GCV3,SPI1,YNL040W
170
-42.07 FAS2,YKR079C,YMR099C,NUC1
140.30.30.10
-28.16 BUD31,PRP22,ISY1,PRP45,LIN1,CDC40
CWC22,PRP2,CEF1,IST3
140.30.20
-28.07 SET2,MOD5,BIM1,PDC2