The Gavin06 (all) solution: best mapping to MIPS using the Simpson coefficient

MIPS name Cluster (genes)
500.40.10
IPI1,NOC2,NOC3,TIF6,CIC1,SPB4
RPL11B,NOG2,RPL3,NOP1,RPL28,RPL11A
RPF1,LSG1,RPL31B,RPL23A,DBP9,YOR1
NSA2,RPL35B,MRT4,RPL16A,LOC1,RPL5
UTP20,NIP7,RPL1A,RPL13B,RPL20A,MDN1
RPL33B,NSA1,RIX1,RSA3,RPS16B,RPL31A
RPS14A,RPL13A,MAK21,RPL14A,NMD3,RPL2B
RPL38,RPL9A,POL5,RPL15A,RLP7,PUF6
RPS18B,ERB1,SDA1,IPI3,RPL25,RPL36B
RPL12A,RPL7B,NOP13,RPL26B,RPL33A,RPL23B
RPF2,RPL8B,ARX1,NOP2,RRP1,REI1
RPL27B,FPR4,MAK5,NOP15,RPL27A,NOP12
DBP10,RPL7A,RPL6B,NOP7,RRP5,NOP4
YCR072C,RPL1B,NOG1,RPL15B,RPL43A,RPP2B
DRS1,RRP12,BRX1,YTM1,SPB1,NUG1
RIX7,RPL19A,RPL6A,BUD20,EBP2,HAS1
500.40.20
SIK1,BFR2,TSR1,ROK1,RPL36A,DIM1
RPS4B,RRP9,NOP58,NOP1,UTP21,NOC4
UTP8,UTP15,KRR1,DBP8,RPS17B,BUD21
RPS16A,RPL16B,UTP20,RPS14B,GBP2,UTP30
NAN1,UTP10,ENP1,IMP3,NOP6,YGR054W
RPS17A,HCA4,LTV1,RPS3,KRE33,EMG1
BMS1,RPS14A,YGR145W,RPS9A,ECM16,ESF1
RPS1B,UTP9,NOP14,FAP7,RPS18A,RPS24B
RIO2,RPL15A,UTP7,MVD1,PWP2,RPS21A
IMP4,UTP4,RPL26B,UTP22,RPL33A,RPS11B
MPP10,ERO1,PNO1,KRI1,MRD1,CBF5
RPS13,UTP6,RPS22B,RPS9B,SRO9,SLX9
RPS4A,RPL6B,NOB1,RPS8B,DIP2,RPS28B
YOR059C,RPS25B,HRR25,RPP2B,RCL1,RRP12
UTP13,RPL17A,UTP18,RRP7,YLR003C,SOF1
RPS7A,RPL19A,RPS8A,HSL1
440.30.10
440.30.10.10
CSN12,LSM7,SEH1,SNU114,PRP21,DHH1
PRP6,STO1,PRP3,LEA1,YLR424W,PRP24
LSM5,SNU23,BUD31,PRP22,LSM6,LSM2
SNU56,PRP38,DIB1,ISY1,PRP45,PRP43
LSM1,PRP40,SMD2,SNT309,CUS1,ECM2
PAT1,HSH155,CDC40,CBC2,SMD1,SMD3
MUD1,PRP31,CWC2,PRP46,SYF1,SNU71
HSH49,YNL224C,RSE1,PRP42,AAR2,PRP4
LIN1,SPP381,PRP9,PRP39,LUC7,BRR2
YKR022C,MSL1,PRP19,CWC22,CWC23,SNU66
CEF1,LSM4,CLF1,SMB1,YBL104C,PRP8
YHC1,SNP1,PRP11,NAM8
360.10.20
PRE4,RPN11,RPN9,RPN12,PRE6,RPN6
RPN10,RPT3,RAD50,BLM3,PRE2,PRE1
RPT1,RPN7,RPT4,RPN2,YOL098C,UBP6
PRE10,RPN3,PRE8,RPS18B,RPN5,YOL087C
PRE3,PUP3,PRE5,CDC6,SCL1,PRE9
RPN8,SRO7,PRE7,NAS6,RPT2,RPN13
RPN1,ECM29,RPT6,MLH2,RPT5
510.40.20
133.40
MED1,MED4,SRB2,FAB1,NGG1,SNF12
RPS17B,SRB4,RPL19B,RPL35B,RPS14B,SGF73
SPT20,SGF29,RPL30,SRB8,SSN2,PGD1
RPL14A,YAP1,RPL18A,GAL11,SSE2,RGR1
GCN5,MLP1,UBP8,HFI1,SRB6,CSE2
SPT3,SPT7,SRB7,RPL33A,MED11,NUT2
MED6,RPL8A,SSN3,ADA2,NUT1,MRPL6
SPT8,VID21,MED8,SRB5,MED7,SIN4
RPL17B
510.190.10.20.10
230.20.20
510.190.10.10
230.20.10
510.190.10.20.20
MED4,TAF11,NGG1,SNF12,TAF6,TAF7
TAF12,SGF73,SPT20,EPL1,SGF29,VAS1
TRA1,TAF10,NAM7,PGD1,YAP1,GCN5
UBP8,HFI1,PDR1,SPT3,SPT7,TAO3
TAF5,SEC2,TAF4,PSK1,HEM13,ESA1
MED6,ARP4,TAF9,SPT15,TAF3,ADA2
NUT1,SPT8,VID21,SIN4,TAF1
510.120
510.10
ARP8,FBA1,DHH1,RPC31,RET1,RPB8
RPA12,RPC34,RPO26,END3,RSC30,RPA190
RPA43,MAF1,RPC40,RPA135,RSC8,YIL056W
RPC19,RPB10,RPC11,RPA49,REB1,RPC25
CDC14,HTA2,AMS1,RPC82,SRO7,RPB5
TFC4,RPC17,RPC53,HTB1,RPO31,RPC37
360.10.10
PRE4,PRE6,RPN10,BLM3,PRE2,PRE1
RPN2,PRE10,RPN3,PRE8,PRE3,PUP3
IMP4,PRE5,SCL1,PRE9,RPN8,PRE7
NAS6,ECM29,MLH2
510.70.20
MED4,TAF14,TAF11,TAF8,TAF6,RPS10B
TAF7,TAF12,TAF10,VPS1,MYO1,SPT7
TAF5,TAF4,HEM13,TAF2,TAF9,SPT15
TAF3,TAF1
510.40.10
510.90
RPB7,TAF14,RPB3,RPB8,RPB9,RPA12
TFG1,RPB2,MET10,RPO26,RPB11,RPA190
RPA43,RPC40,SPT5,RPA135,RPB10,SPT4
RPA49,YER139C,MED6,RPB5,AOS1,RPB4
ASR1,IWR1,RPO21,TFG2
510.190.50
SWI3,TAF14,SNF12,ARP9,SNF5,SNF2
SNF6,YAP1,VPS1,PDR1,SWI1,SNF11
YFL049W,RTT102,ARP7
260.60
GSG1,TRS23,TRS120,KRE11,SKN1,BET5
FKS1,TRS130,BET3,TRS31,TRS33,TRS20
220
VMA6,VMA7,VMA13,VMA2,RAV2,VMA10
VMA8,NOP6,VMA4,EMI2,VPH2,RAV1
VMA5,VPH1,TFP1,YER036C
400
320
ISW2,KAP114,RSC4,HHF1,SWI3,RSC3
STH1,RSC9,ITC1,SNF12,RSC2,YKU80
ARP9,ISW1,SFH1,NPL6,RSC58,RSC30
YKU70,TOP1,SNF5,SNF2,MOT1,SNF6
RSC8,YIL056W,RSC1,VPS1,PDR1,REB1
SWI1,IOC3,HTA2,ABF2,SNF11,SPT15
YFL049W,RTT102,ARP7,HTB1,RSC6,STM1
HTA1
60
CDC27,APC1,YEF3,APC2,CDC16,APC5
CDC23,APC4,APC9
440.12.10
MTR3,RRP42,RRP6,RRP46,UTP20,SKI6
UTP10,SKI2,THS1,SKI8,RRP45,SKI3
YIR035C,LRP1,ECM16,GRS1,RRP43,CSL4
RPL4B,RRP4,DIS3,SKI7,RRP40
260.30.10
380
SEC53,VPS13,ILV5,CDC19,CSE1,RET2
HSC82,TDH1,RPS0A,ADE3,LYS12,SEC28
TRM3,RPL30,ARO1,HSP82,RPA135,FAS2
MSN5,GRS1,SEC21,FUR1,SAR1,YDR341C
COP1,TOM1,YNK1,SEC26,PFK1,RET3
TFP1,EFT2,GCN20,AAP1',DPS1,SEC27
ILV6,RPT5
160
VPS9,EXO84,SEC8,SEC5,SEC6,SEC10
EXO70,SEC15,RPC17,SEC3
520.40
SEC65,SRP21,AHA1,SST2,SRP72,LHP1
HSP82,SRP68,SRP54,BEM2,SRP14
500.10.40
TIF34,RPS5,GCD11,RPS10A,RPS10B,RPL16A
RPL16B,RLI1,RPS22A,RPS17A,RPS16B,RPL18B
FUN12,RPS14A,TIF35,RPL13A,RPS9A,RPS1B
RPS18A,RPL18A,PRT1,ATG9,RPG1,RPS6A
NIP1,RPL8B,RPS7B,TIF5,CBF5,RPS13
RPS22B,RPL7A,RPS6B,RPS11A,IST2,RPS8B
RPS28B,SUI1,DED1,GLT1,RPS7A,RPS8A
RPL6A,HCR1
410.35
410.30
410.20
410.10
ORC4,PAB1,RPL16B,ORC3,ORC1,ORC5
ORC6,ORC2
310.40
NUP145,SEH1,SEC31,NUP84,NUP85,SEC16
NUP120,CYS4,STT3,GRH1,ERO1,SEC13
MEX67,SEC23,SEC24,SFB2
260.90
ARC15,NOG2,CCT8,ARC19,ACC1,ARC35
ARC40,ARP3,ARC18,ARP2,CCT5
130
CCT6,CCT8,CCT7,PLP2,TRIC,TUB2
VID27,CCT4,CCT5,CCT2,HGH1,ILV6
510.150
TFC8,TFC7,TFC3,TFC1,TFC4,TFC6
500.10.30
RPL36A,GCN3,CPA2,RPL11B,GCD11,PRO1
XKS1,RPL35B,MET10,SUI3,GCD7,RPL12B
TOP2,RPA135,GCD6,RPC19,PDR1,ALA1
RPL36B,RPL12A,GCD2,RPL33A,CDC123,HIR2
CCT4,ILV1,GCD1,SUI2
470.10
GAL83,SNF4,PAK1,BMH1,SNF1,ADE16
REG1,STE23,SIP1,SIP2
440.14.10
440.12.20
POP8,POP1,POP5,RPP1,POP3,POP4
410.40.30
VPS13,IMD3,CTF18,RFC4,DPB4,RFC2
PRI2,RFC1,POL12,RFC3,PRI1,RPS0B
RFC5,RPS6B,ELG1,DPB2,USO1,POL2
POL1
390
20
SPA2,CYM1,PDX1,PDA1,DUR1,2,MSS51
PDB1,ULP1,YMR31,KGD2,LPD1,PRP46
HSP42,LAT1,PSE1,KGD1,DOA4
260.30.20
RPL10,SEC31,SEC16,CYS4,SPT6,GRH1
RIM1,RPL7A,SEC13,SEC23,KAR2,SEC24
SFB2
140.10.20
CDC3,CDC10,CDC11,SHS1,MDH1,CDC12
BUD4
520.20
TIF34,SWP1,STT3,WBP1,ERO1,OST1
PRS1
520.10.20
FKS1,SEC62,SEC72,SEC63,ANP1,SEC66
500.20.10
YDR314C,EFB1,CAM1,RPS24B,YBR025C,TEF2
EFT2,TEF4,RPN1,NEW1,SBP1,HSL1
440.10.20
440.10.10
440.10.30
FIP1,CFT2,RNA15,SEC31,PFS2,REF2
SWD2,BUD14,CFT1,RPL16B,YSH1,PAP1
GSY2,PTI1,GLC7,SYC1,HCA4,RSA3
IMD2,SSU72,RPL13A,YTH1,MPE1,ADE16
TKL1,PCF11,VID24,SSA3,RNA14,SOL2
PTA1,RPL6B,RPL8A,SDS22,CLP1,HTA1
410.40.60
SRP102,RFC2,PRI2,RFC1,POL12,RFC3
SRP101,PRI1,RFC5,RPS6B,USO1,POL1
260.80
90.20
PEP5,VPS8,VAM6,VPS33,VPS16,PEP3
PRS1,VPS41,AAP1'
260.20.10
APL2,RPL3,RPL11A,SXM1,RPL19B,RPL16B
APM1,RPL1A,YFL034W,RPL9A,SDA1,APS1
RPL36B,RPS6A,APM2,RPL6B,APL4,PGI1
MIS1,HEK2,RPL19A
140.20.30
140.20.20
EHT1,CDC47,HIR3,PWP1,MYO5,IMD4
MYO4,SHE2,MYO2,SHE3,CDC46,CRN1
PDR5,MLC1,YIR003W,POL5,CAP1,MYO1
CAP2,YER071C,RAD53,NOP12,ACT1,CMD1
MAM33,SHE4,ERG26,BRX1
133.10
290.20
CKS1,CDC28,TIF1,CLB3,SIC1,CYS4
MET10,CLN2,CLN1,SSC1
120.20
BFR2,ROK1,DIM1,RPS4B,RRP9,NOP58
NOP1,UTP21,CKB1,NOC4,RPS16A,GBP2
UTP30,UTP10,IMP3,RPS17A,EMG1,BMS1
FAS2,YGR145W,ECM16,RPS1B,NOP14,RPS24B
UTP7,CKA1,PWP2,IMP4,RPL26B,UTP22
MPP10,CKB2,PNO1,MRD1,RPS13,UTP6
RPS4A,RPS11A,DIP2,YOR059C,RCL1,UTP13
UTP18,RRP7,CKA2,YLR003C
510.190.110
POP2,CAF40,RVB2,CDC39,RVB1,ATG9
PRI2,POL12,CAF130,CCR4,PRI1,RPS6B
POL1
510.110
133.50
CTK3,SSA1,RPL20A,YOR164C,RPS9A,SSE2
CTK2,RPS13,RPL1B,CTK1
510.100
510.180.10.30
IMD3,CDC27,TFB4,KRS1,MRPS28,SSL1
TFB1,FAP1,TFA1
500.10.20
RPS4B,TIF34,IMD3,NAT1,GCD11,SUI3
RLI1,RPS22A,RPS17A,FUN12,TIF35,RPS9A
RPS18A,ATG9,RPG1,DBP2,RPS6A,RPS11B
NIP1,TIF5,RPS22B,RPS11A,RPS8B,SUI2
RPS7A,HCR1
500.10.110
440.30.20
NAB3,BRR1,STO1,PAB1,AIR2,SGN1
CDC33,TRF4,NRD1,NPL3,LHP1,MTR4
SGV1,NAB6,IML1,TIF4631,SMD2,NAM7
CBC2,SMD3,NRP1,RNT1,RPL4B,SRO9
SCP160,BUR2,TIF4632,SBP1,SEN1,HTA1
480.10.05
SPC98,SPC72,SPC97,PFK1,TUB4
450
REF2,SWD2,BUD14,CFT1,YSH1,PAP1
GSY2,PTI1,GLC7,BMH1,ADE16,REG1
STE23,SOL2,RNR1,SDS22
440.12.30
SIK1,BFR2,ROK1,RPL36A,RPL11B,NOP58
NOP1,KRR1,DBP8,BUD21,RPS16A,RPL16B
UTP20,RPS14B,UTP30,RPL13B,UTP10,IMP3
NOP6,RPS22A,HCA4,KRE33,EMG1,BMS1
RPS14A,RPS24A,ECM16,ESF1,RPS1B,RPS18A
RPL2B,RPS24B,RPL15A,RPL4A,UTP7,MVD1
RPL26B,RPL33A,MPP10,PRE9,ERO1,CBF5
SRO9,RPL6B,RPP2B,SOF1,RPL19A
420.50
ISW2,ARP8,ATP3,ATP1,ITC1,RVB2
IES5,RAD50,IES3,ARF1,VPS1,NHP10
SAR1,GFA1,ACT1,INO80,ARP4,TFP1
IES1,ATP2
410.40.20
510.180.50.20
510.180.50.10
510.180.20
MSH2,LCD1,PGK1,YDL156W,MSH6,MSH3
MPH1,RAD52,RFA2,RFA1,VPS1,RAD51
KAP95,RFA3,RIM1,DNA2,RAD16,MEC1
310.10
310
310.20
GLE2,MRPL35,MRPL1,MRPL8,NSP1,NIC96
NUP159,NUP82,MRPL15,SSA2,NUP57,NUP192
MRPL3,MRPL24,NUP116
260.20.30
ENO2,APL5,APL6,APM3
240.20
510.190.150
230.20.40
TUP1,YBR095C,CKB1,YMR075W,ISW1,RXT3
SIN3,RPL35B,YAF9,EAF5,EAF3,EPL1
TOP1,RPD3,TRA1,DEP1,CTI6,ECM16
RSC8,SPT6,CKA1,IOC3,RPL33A,HTA2
ABF2,PHO23,ESA1,ARP4,SAP30,UME6
UME1,SDS3,RPL17A,VID21,CKA2
177
YKE2,PAC10,GIM3
133.20
PHO80,CYR1,PHO85,YGR250C,PCL8,ACT1
SRV2,PHO81,MRPL51
90.10
CAC2,MSI1
80
230.10
HHF1,CPA2,RPS10A,PRO1,RPT3,XKS1
YOL054W,PSD2,HHF2,RPL38,ECM5,HAT2
HAT1,CPA1,HIF1,USO1,RPT2,YFR006W
RPT5
70
HSC82,AHA1,TRP3,TRP2,ARO1,SAM1
PFK1,GFA1
520.50
SRP102,SRP101
510.190.40
NOT5,RPS10B,CDC36,MRD1,RPS13,RPS4A
510.190.10
MED4,SRB2,NGG1,TAF12,SPT20,SGF29
YFL034W,GCN5,PDR1,MYO1,TAO3,SEC2
ACT1,SPT15,TAF1
510.180.30.10
YKU80,YKU70
510.170
PYK2,CCT8,YKL088W,PPZ1,ARO1,GDH1
FUN12,TOP2,CEG1,SPT16,NIP1,MRS6
YPT52,SSA3,VPS3,CKB2,LSM12,SSA4
SKP1,YMR258C,PBP1,CET1
500.20.20
170
SEC53,MAE1,VPS13,ILV5,ARO3,PSA1
FAS1,CSE1,PRS3,CCT6,HSC82,YHB1
RVB2,TDH1,RPS0A,EFT1,ADE3,MDN1
TUB3,GEA2,TRM3,RPL30,RPL18B,ACC1
HSP60,ARO1,URA7,HSP82,FAS2,MSN5
GRS1,SEC21,FUR1,SAR1,YDR341C,TOM1
YNK1,PFK1,RNR1,GFA1,TUB1,ACS2
ILS1,TFP1,EFT2,CCT4,ILV1,GCN20
GCN1,SAP155,YER036C,DPS1
500.10.80
NAB3,KEM1,PAB1,TEF1,SGN1,NRD1
NPL3,SNU56,LHP1,MTR4,NAB6,IML1
RPS22A,HCA4,TIF4631,RPS9A,NAM7,CBC2
RIO2,NRP1,STE23,YGR250C,RPS11A,RPS8B
HRR25,TIF4632,SNP1,SEN1,NAM8
500.10.50
TIF1,RPN10,RPL1A,RPL35A,RPN2,URA7
RPS14A,RPL2B,TIF2,RPS6B,MRPL3,RPL19A
RPL17B
480.20
480.10
TID3,SPC24,NUF2,SPC25
440.30.10.20
CSN12,PRP21,BRR1,PRP3,LEA1,YLR424W
CDC33,SNU23,PRP38,DIB1,ISY1,PRP43
SMD2,SNT309,CUS1,HSH155,SMD1,SMD3
PRP31,SYF1,HSH49,RSE1,LIN1,SPP381
PRP9,LUC7,BRR2,MSL1,CWC23,SNU66
CLF1,SMB1,YBL104C,YHC1,PRP11
430
PWP1,RPL3,RPL19B,CCT8,RPL13B,SMC1
VAS1,RNR4,ARO1,RPS6A,RNR2,NOP12
SMC3,EFT2,RPL15B,RPL20B,YPL207W
420.30
COR1,DUR1,2,PRO1,NPL3,SYF1,QCR2
MRPL22
410.40.90
CDC2,HYS2
410.40.100
RRP8,STO1,RPL31B,KEM1,IMD4,SGN1
RPS10B,CDC33,PUS7,GBP2,LHP1,RPS22A
TIF4631,TIF2,RPS6A,YAL036C,CBF5,SRO9
RPS20,DPB2,MRP7,POL2,SBP1,SNP1
350.30
EFT1,MAS2,DPH5,RPL6B,MAS1
350.10.10
PMR1,GDH1,HMG1,AFG3,PHB2,PHB1
YTA12,KAP122,PGI1
340
YHB1,AHA1,PFK2,CCT8,ARO1,ACO1
PFK1,GFA1
330
TSC13,FRS1,FRS2
280
RPS4B,LYS5,SXM1,LYS2
260.50.20
260.50.10
SEC22,UFE1,YKT6,USE1,FKS1,THS1
TIP20,ADH1,VTI1,DSL1,CDC6,PEP12
SEC39
260.30.30.10
VPS35,VPS5,VPS29
260.20.20
APL1,APM4,RPS1A,RPL16A,RPL35A,RPS17A
LTV1,RPL2B,RPS6A,RPL8B,RPL1B,RPL17A
260.10
TIF1,VPS13,URA2,CLC1,CSE1,ARP5
CCT8,MET10,KTR6,LYS12,RVB1,HSP82
MSN5,CRM1,UFD4,CHC1,FUR1,SAR1
YDR341C,YNK1,SSA4,ACT1,EFT2,IES1
DPS1
140.30.10
TIF1,AHA1,TDH2,LYS12,FAS2,UFD4
TIF2,TUB2,TUB1
110
BCY1,TPK2
500.60
RPS4B,SCS2,OSH2,YAR044W,MRP8,SER33
SUP45,OPI1,NUM1,PIL1,YGR130C,SWH1
RPS7A
500.50
CYM1,MSS51,EDE1,CYS4,MET10,SYP1
ENO1,CLN2,TRM3,IST2,SSC1,OYE2
410.40.140
RSC3,STH1,RSC2,TOP1,YIL056W,RSC1
VPS1,PDR1,REB1,ABF2
140.30.30.10
COG8,COG7,COG4,IML1,COG6,NRP1
COG2,COG3,COG5,COG1
140.30.20
BFR2,NOP1,KRR1,RPS14B,UTP30,IMP3
RPS3,RPS14A,YGR145W,FAP7,MPP10,CBF5
SOF1,RPS7A